{"id":18431,"date":"2018-10-11T16:24:08","date_gmt":"2018-10-11T20:24:08","guid":{"rendered":"https:\/\/ugaresearch.uga.edu\/?p=18431"},"modified":"2019-09-18T10:29:16","modified_gmt":"2019-09-18T14:29:16","slug":"cold-case","status":"publish","type":"post","link":"https:\/\/research.uga.edu\/news\/cold-case\/","title":{"rendered":"Cold case"},"content":{"rendered":"<div class=\"wpb-content-wrapper\"><p>[vc_row][vc_column][vc_column_text]January in Antarctica is the height of summer, with temperatures on the Antarctic Peninsula reaching a balmy 32 degrees F. But for oceanographer James Hollibaugh, a summer cruise aboard the research vessel Lawrence M. Gould means the sun barely dips below the horizon, and glimpses of towering icebergs, pods of whales and flocks of penguins are the reward for 20-hour days hauling up seawater samples from the Southern Ocean\u2019s icy depths.<\/p>\n<p>Hollibaugh studies microorganisms called archaea, whose discovery just 40 years ago upended scientists\u2019 understanding of the tree of life. Suddenly there were three branches: bacteria, eukaryotes\u2014which include plants and animals\u2014and archaea, which look like bacteria but are biochemically and physically unique. Scientists like Hollibaugh are working to understand archaea\u2019s vast diversity and ubiquity, including their role in the Earth\u2019s oceans and extreme environments, where they thrive.<\/p>\n<p>Specifically, he is studying a subgroup called thaumarchaea, which take ammonium produced by other organisms and use it as an energy source. By burning it with oxygen, they convert ammonium to nitrate, facilitating removal of nitrogen from the ocean.<\/p>\n<p>\u201cThis is important,\u201d says Hollibaugh, Distinguished Research Professor of Marine Sciences, \u201cbecause one of the problems facing the Earth right now is too much nitrogen.\u201d<\/p>\n<script type=\"text\/javascript\">jQuery(function() { _initLayerSlider( '#layerslider_3_ab4l5ji0kjvx', {createdWith: '6.7.6', sliderVersion: '6.7.6', allowFullscreen: true, autoStart: false, pauseOnHover: 'enabled', skin: 'numbers', sliderFadeInDuration: 350, navStartStop: false, showCircleTimer: false, useSrcset: true, skinsPath: 'https:\/\/research.uga.edu\/news\/wp-content\/plugins\/LayerSlider\/assets\/static\/layerslider\/skins\/', performanceMode: true}); });<\/script><div id=\"layerslider_3_ab4l5ji0kjvx\"  class=\"ls-wp-container fitvidsignore ls-selectable\" style=\"width:1043px;height:593px;margin:0 auto;margin-bottom: 0px;\"><div class=\"ls-slide\" ><img loading=\"lazy\" decoding=\"async\" width=\"1043\" height=\"593\" src=\"https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/hollibaugh-james.jpg\" class=\"ls-bg\" alt=\"James Hollibaugh in Antarctica\" srcset=\"https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/hollibaugh-james.jpg 1043w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/hollibaugh-james-300x171.jpg 300w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/hollibaugh-james-768x437.jpg 768w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/hollibaugh-james-800x455.jpg 800w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/hollibaugh-james-1040x591.jpg 1040w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/hollibaugh-james-720x409.jpg 720w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/hollibaugh-james-480x273.jpg 480w\" sizes=\"auto, (max-width: 34.9rem) calc(100vw - 2rem), (max-width: 53rem) calc(8 * (100vw \/ 12)), (min-width: 53rem) calc(6 * (100vw \/ 12)), 100vw\" \/><\/div><div class=\"ls-slide\" ><img loading=\"lazy\" decoding=\"async\" width=\"1043\" height=\"593\" src=\"https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-2.jpg\" class=\"ls-bg\" alt=\"image of Antarctic mountains from the sea\" srcset=\"https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-2.jpg 1043w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-2-300x171.jpg 300w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-2-768x437.jpg 768w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-2-800x455.jpg 800w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-2-1040x591.jpg 1040w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-2-720x409.jpg 720w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-2-480x273.jpg 480w\" sizes=\"auto, (max-width: 34.9rem) calc(100vw - 2rem), (max-width: 53rem) calc(8 * (100vw \/ 12)), (min-width: 53rem) calc(6 * (100vw \/ 12)), 100vw\" \/><\/div><div class=\"ls-slide\" ><img loading=\"lazy\" decoding=\"async\" width=\"1043\" height=\"593\" src=\"https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-7.jpg\" class=\"ls-bg\" alt=\"iceberg floating in ocean\" srcset=\"https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-7.jpg 1043w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-7-300x171.jpg 300w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-7-768x437.jpg 768w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-7-800x455.jpg 800w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-7-1040x591.jpg 1040w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-7-720x409.jpg 720w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-7-480x273.jpg 480w\" sizes=\"auto, (max-width: 34.9rem) calc(100vw - 2rem), (max-width: 53rem) calc(8 * (100vw \/ 12)), (min-width: 53rem) calc(6 * (100vw \/ 12)), 100vw\" \/><\/div><div class=\"ls-slide\" ><img loading=\"lazy\" decoding=\"async\" width=\"1043\" height=\"593\" src=\"https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-6.jpg\" class=\"ls-bg\" alt=\"chunks of ice in ocean\" srcset=\"https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-6.jpg 1043w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-6-300x171.jpg 300w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-6-768x437.jpg 768w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-6-800x455.jpg 800w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-6-1040x591.jpg 1040w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-6-720x409.jpg 720w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-6-480x273.jpg 480w\" sizes=\"auto, (max-width: 34.9rem) calc(100vw - 2rem), (max-width: 53rem) calc(8 * (100vw \/ 12)), (min-width: 53rem) calc(6 * (100vw \/ 12)), 100vw\" \/><\/div><div class=\"ls-slide\" ><img loading=\"lazy\" decoding=\"async\" width=\"1043\" height=\"593\" src=\"https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-3.jpg\" class=\"ls-bg\" alt=\"frozen Antarctic landscape\" srcset=\"https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-3.jpg 1043w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-3-300x171.jpg 300w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-3-768x437.jpg 768w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-3-800x455.jpg 800w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-3-1040x591.jpg 1040w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-3-720x409.jpg 720w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-3-480x273.jpg 480w\" sizes=\"auto, (max-width: 34.9rem) calc(100vw - 2rem), (max-width: 53rem) calc(8 * (100vw \/ 12)), (min-width: 53rem) calc(6 * (100vw \/ 12)), 100vw\" \/><\/div><div class=\"ls-slide\" ><img loading=\"lazy\" decoding=\"async\" width=\"1043\" height=\"593\" src=\"https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-5.jpg\" class=\"ls-bg\" alt=\"A view of snow-covered mountains and rocky peaks across a wide expanse of ocean, seen from the deck of a ship under a cloudy sky.\" srcset=\"https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-5.jpg 1043w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-5-300x171.jpg 300w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-5-768x437.jpg 768w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-5-800x455.jpg 800w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-5-1040x591.jpg 1040w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-5-720x409.jpg 720w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-5-480x273.jpg 480w\" sizes=\"auto, (max-width: 34.9rem) calc(100vw - 2rem), (max-width: 53rem) calc(8 * (100vw \/ 12)), (min-width: 53rem) calc(6 * (100vw \/ 12)), 100vw\" \/><\/div><div class=\"ls-slide\" ><img loading=\"lazy\" decoding=\"async\" width=\"1043\" height=\"593\" src=\"https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-3.jpg\" class=\"ls-bg\" alt=\"frozen Antarctic landscape\" srcset=\"https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-3.jpg 1043w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-3-300x171.jpg 300w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-3-768x437.jpg 768w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-3-800x455.jpg 800w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-3-1040x591.jpg 1040w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-3-720x409.jpg 720w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-3-480x273.jpg 480w\" sizes=\"auto, (max-width: 34.9rem) calc(100vw - 2rem), (max-width: 53rem) calc(8 * (100vw \/ 12)), (min-width: 53rem) calc(6 * (100vw \/ 12)), 100vw\" \/><\/div><div class=\"ls-slide\" ><img loading=\"lazy\" decoding=\"async\" width=\"1043\" height=\"593\" src=\"https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/hollibaugh-james-2.jpg\" class=\"ls-bg\" alt=\"James Hollibaugh on glacier in Antarctica\" srcset=\"https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/hollibaugh-james-2.jpg 1043w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/hollibaugh-james-2-300x171.jpg 300w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/hollibaugh-james-2-768x437.jpg 768w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/hollibaugh-james-2-800x455.jpg 800w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/hollibaugh-james-2-1040x591.jpg 1040w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/hollibaugh-james-2-720x409.jpg 720w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/hollibaugh-james-2-480x273.jpg 480w\" sizes=\"auto, (max-width: 34.9rem) calc(100vw - 2rem), (max-width: 53rem) calc(8 * (100vw \/ 12)), (min-width: 53rem) calc(6 * (100vw \/ 12)), 100vw\" \/><\/div><\/div>\n<p>Excess nitrogen in coastal areas\u2014stemming from runoff carrying fertilizer and animal waste\u2014can cause harmful algal blooms that poison people, shellfish and marine animals (the bloom off Florida\u2019s west coast this summer is a good example). When the algae die, they settle to the bottom and decompose, using up oxygen and creating oxygen-deficient zones that kill organisms like fish, crab, shrimp and oysters.<\/p>\n<p>In addition to their role in removing excess nitrogen, thaumarchaea may also be significant in supporting the Antarctic food chain, according to Hollibaugh. Ocean food chains typically are driven by photosynthesis, but that\u2019s not possible during winter in polar regions when light levels in the water are reduced by short days, ice cover and low sun angles.<\/p>\n<p>\u201cWe\u2019re looking at the contribution of this odd geochemical process to food chain dynamics during the winter when there\u2019s no light and no plant growth,\u201d he says. \u201cHow do plankton survive the winter? What do they eat? How do they grow? Does this process contribute significantly to their survival?\u201d<\/p>\n<p>During Hollibaugh\u2019s trip, supported by a grant from the National Science Foundation, he took samples at different depths in the water column in order to measure thaumarchaeal growth based on rates of ammonium oxidation. His previous research showed the same thaumarchaea are there year-round.<\/p>\n<p>\u201cFiguring this out,\u201d he says, \u201cwill help us understand, at a global level, long-term changes in the Earth\u2019s ecosystems.\u201d<\/p>\n<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter wp-image-18465 size-full\" src=\"https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-map.jpg\" alt=\"map of Antarctica showing research sample site off the coast\" width=\"1043\" height=\"1043\" srcset=\"https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-map.jpg 1043w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-map-150x150.jpg 150w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-map-300x300.jpg 300w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-map-768x768.jpg 768w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-map-800x800.jpg 800w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-map-1040x1040.jpg 1040w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-map-720x720.jpg 720w, https:\/\/research.uga.edu\/news\/wp-content\/uploads\/sites\/19\/2018\/10\/Antarctica-map-480x480.jpg 480w\" sizes=\"auto, (max-width: 1043px) 100vw, 1043px\" \/>[\/vc_column_text][\/vc_column][\/vc_row]<\/p>\n<\/div>","protected":false},"excerpt":{"rendered":"<p>Oceanographer James Hollibaugh studies microbes that survive winter in Antarctica<\/p>\n","protected":false},"author":82,"featured_media":26339,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"look-single.php","format":"standard","meta":{"_acf_changed":false,"footnotes":"","_links_to":"","_links_to_target":""},"categories":[298],"tags":[],"post_medium":[316],"publications":[],"authors":[345],"photographers":[426],"video_credit":[],"takeaways":[],"class_list":["post-18431","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-marine-science","post_medium-look","authors-allyson-mann","photographers-james-hollibaugh","entry"],"acf":[],"aioseo_notices":[],"_links":{"self":[{"href":"https:\/\/research.uga.edu\/news\/wp-json\/wp\/v2\/posts\/18431","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/research.uga.edu\/news\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/research.uga.edu\/news\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/research.uga.edu\/news\/wp-json\/wp\/v2\/users\/82"}],"replies":[{"embeddable":true,"href":"https:\/\/research.uga.edu\/news\/wp-json\/wp\/v2\/comments?post=18431"}],"version-history":[{"count":0,"href":"https:\/\/research.uga.edu\/news\/wp-json\/wp\/v2\/posts\/18431\/revisions"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/research.uga.edu\/news\/wp-json\/wp\/v2\/media\/26339"}],"wp:attachment":[{"href":"https:\/\/research.uga.edu\/news\/wp-json\/wp\/v2\/media?parent=18431"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/research.uga.edu\/news\/wp-json\/wp\/v2\/categories?post=18431"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/research.uga.edu\/news\/wp-json\/wp\/v2\/tags?post=18431"},{"taxonomy":"post_medium","embeddable":true,"href":"https:\/\/research.uga.edu\/news\/wp-json\/wp\/v2\/post_medium?post=18431"},{"taxonomy":"publications","embeddable":true,"href":"https:\/\/research.uga.edu\/news\/wp-json\/wp\/v2\/publications?post=18431"},{"taxonomy":"authors","embeddable":true,"href":"https:\/\/research.uga.edu\/news\/wp-json\/wp\/v2\/authors?post=18431"},{"taxonomy":"photographers","embeddable":true,"href":"https:\/\/research.uga.edu\/news\/wp-json\/wp\/v2\/photographers?post=18431"},{"taxonomy":"video_credit","embeddable":true,"href":"https:\/\/research.uga.edu\/news\/wp-json\/wp\/v2\/video_credit?post=18431"},{"taxonomy":"takeaways","embeddable":true,"href":"https:\/\/research.uga.edu\/news\/wp-json\/wp\/v2\/takeaways?post=18431"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}